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Counting ancestral reconstructions in a fixed phylogeny
Journal article   Peer reviewed

Counting ancestral reconstructions in a fixed phylogeny

Tobias Thicrer, David Bryant and Mike Steel
Annals of combinatorics, Vol.12(1), pp.123-132
04/2008

Abstract

Mathematics Mathematics, Applied Physical Sciences Science & Technology
We give formulas for calculating in polynomial time the number of ancestral reconstructions for a tree with binary leaf- and root labels for each number of 0 -> 1 and 1 -> 0 arcs. For trees of fixed degree, the corresponding numbers of 0 -> 0 and 1 -> 1 arcs can be deduced. We calculate intervals for the relative cost of 0 -> 1 and 1 -> 0 transitions over which the same labelings remain the cheapest.

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