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¹H, ¹³C, ¹⁵N backbone chemical shift assignment of P18ink4c from Danio rerio (zebrafish) using solution-state NMR spectroscopy
Journal article   Open access   Peer reviewed

¹H, ¹³C, ¹⁵N backbone chemical shift assignment of P18ink4c from Danio rerio (zebrafish) using solution-state NMR spectroscopy

Aakriti Sethi, Pierre de Cordovez, Biswaranjan Mohanty, Vanessa K Morris and Christoph Göbl
Biomolecular NMR assignments
28/07/2025
Handle:
https://hdl.handle.net/10523/47389

Abstract

Ankyrin repeat protein INK4 family of proteins Danio rerio P18ink4c NMR resonance assignment Centre for Redox Biology & Medicine Collection
The INK4 family of proteins restricts uncontrolled cell cycle progression by inhibiting cyclin-dependent kinases 4 and 6. The family consists of small, monomeric and mainly alpha-helical proteins that are conserved across all vertebrate species. We recently discovered that the human INK4 protein p16 converts into amyloid structures upon oxidation of the single cysteine residue present. Here we investigate the Danio rerio (zebrafish) orthologue P18 protein. The 170-residue protein contains two cysteines which may similarly mediate transition into amyloids upon oxidation. We present the near complete backbone assignment of the reduced P18 protein in solution. These chemical shift data provide the foundation for studying oxidation-induced structural changes and protein interactions.
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s12104-025-10245-21.45 MBDownloadView
Published (Version of record) Open Access CC BY V4.0
url
https://doi.org/10.1007/s12104-025-10245-2View
Published (Version of record) Open CC BY V4.0

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