Whole genomes from bacteria collected at diagnostic units around the world 2020

Sidsel Nag; Gunhild Larsen; Judit Szarvas; Laura Elmlund Kohl Birkedahl; Gábor Máté Gulyás; Wojchiech Jakub Ciok; Timmie Mikkel Lagermann; Silva Tafaj; Susan Bradbury; Peter Collignon; Denise Daley; Victorien Dougnon; Kafayath Fabiyi; Boubacar Coulibaly; René Dembélé; Georgette Nikiema; Natama Magloire; Isidore Juste Ouindgueta; Zenat Zebin Hossain; Anowara Begum; Deyan Donchev; Mathew Diggle; LeeAnn Turnbull; Simon Lévesque; Livia Berlinger; Kirstine Kobberoe Sogaard; Paula Diaz Guevara; Carolina Duarte Valderrama; Panagiota Maikanti; Jana Amlerova; Pavel Drevinek; Jan Tkadlec; Milica Dilas; Achim Kaasch; Henrik Torkil Westh; Mohamed Azzedine Bachtarzi; Wahiba Amhis; Carolina Elisabeth Satán Salazar; JoséEduardo Villacis; Mária Angeles Dominguez Lúzon; Dámaris Berbel Palau; Claire Duployez; Maxime Paluche; Solomon Asante-Sefa; Mie Moller; Margaret Ip; Ivana Mareković; Agnes Pál-Sonnevend; Clementiza Elvezia Cocuzza; Asta Dambrauskiene; Alexandre Macanze; Anelsio Cossa; Inácio Mandomando; Philip Nwajiobi-Princewill; Iruka N. Okeke; Aderemi O. Kehinde; Ini Adebiyi; Ifeoluwa Akintayo; Oluwafemi Popoola; Anthony Onipede; Anita Blomfeldt; Nora Elisabeth Nyquist; Kiri Bocker; James Ussher; Amjad Ali; Nimat Ullah; Habibullah Khan; Natalie Weiler Gustafson; Ikhlas Jarrar; Arif Al-Hamad; Viravarn Luvira; Wantana Paveenkittiporn; Irmak Baran; James C. L. Mwansa; Linda Sikakwa; Kaunda Yamba; Rene Sjogren Hendriksen; Frank Moller Aarestrup

doi:10.1038/s41597-023-02502-7

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Whole genomes from bacteria collected at diagnostic units around the world 2020

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Whole genomes from bacteria collected at diagnostic units around the world 2020

Sidsel Nag, Gunhild Larsen, Judit Szarvas, Laura Elmlund Kohl Birkedahl, Gábor Máté Gulyás, Wojchiech Jakub Ciok, Timmie Mikkel Lagermann, Silva Tafaj, Susan Bradbury, Peter Collignon, …

Scientific data, Vol.10(1), pp.628-628

16/09/2023

DOI: https://doi.org/10.1038/s41597-023-02502-7

Handle:

https://hdl.handle.net/10523/19661

Abstract

Data Descriptor

The Two Weeks in the World research project has resulted in a dataset of 3087 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units in 35 countries around the world during 2020. A relational database is available with metadata and summary data from selected bioinformatic analysis, such as species prediction and identification of acquired resistance genes.

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Record Identifier: 9926495485601891
Title: Whole genomes from bacteria collected at diagnostic units around the world 2020
Creators: Sidsel Nag
Gunhild Larsen
Judit Szarvas
Laura Elmlund Kohl Birkedahl
Gábor Máté Gulyás
Wojchiech Jakub Ciok
Timmie Mikkel Lagermann
Silva Tafaj
Susan Bradbury
Peter Collignon
Denise Daley
Victorien Dougnon
Kafayath Fabiyi
Boubacar Coulibaly
René Dembélé
Georgette Nikiema
Natama Magloire
Isidore Juste Ouindgueta
Zenat Zebin Hossain
Anowara Begum
Deyan Donchev
Mathew Diggle
LeeAnn Turnbull
Simon Lévesque
Livia Berlinger
Kirstine Kobberoe Sogaard
Paula Diaz Guevara
Carolina Duarte Valderrama
Panagiota Maikanti
Jana Amlerova
Pavel Drevinek
Jan Tkadlec
Milica Dilas
Achim Kaasch
Henrik Torkil Westh
Mohamed Azzedine Bachtarzi
Wahiba Amhis
Carolina Elisabeth Satán Salazar
JoséEduardo Villacis
Mária Angeles Dominguez Lúzon
Dámaris Berbel Palau
Claire Duployez
Maxime Paluche
Solomon Asante-Sefa
Mie Moller
Margaret Ip
Ivana Mareković
Agnes Pál-Sonnevend
Clementiza Elvezia Cocuzza
Asta Dambrauskiene
Alexandre Macanze
Anelsio Cossa
Inácio Mandomando
Philip Nwajiobi-Princewill
Iruka N. Okeke
Aderemi O. Kehinde
Ini Adebiyi
Ifeoluwa Akintayo
Oluwafemi Popoola
Anthony Onipede
Anita Blomfeldt
Nora Elisabeth Nyquist
Kiri Bocker
James Ussher
Amjad Ali
Nimat Ullah
Habibullah Khan
Natalie Weiler Gustafson
Ikhlas Jarrar
Arif Al-Hamad
Viravarn Luvira
Wantana Paveenkittiporn
Irmak Baran
James C. L. Mwansa
Linda Sikakwa
Kaunda Yamba
Rene Sjogren Hendriksen
Frank Moller Aarestrup
Publication Details: Scientific data, Vol.10(1), pp.628-628
Academic Unit: Microbiology and Immunology
Publisher: Nature Publishing Group UK
Grant note: NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856; NNF16OC0021856 / ; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 87473; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735; 874735 / ;
Date published ; e-published: 16/09/2023
Language: English
Resource Type ; Subtype: Journal article